Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | DW916_04780 | Not Available | Negative | 1181083 - 1184814 | 138110.0 |
| hypothetical protein | DW916_04785 | Not Available | Positive | 1185257 - 1186111 | 31699.7 |
| nadp-dependent isocitrate dehydrogenase | DW916_04790 | Not Available | Positive | 1186401 - 1187612 | 45538.4 |
| xre family transcriptional regulator | DW916_04795 | Not Available | Negative | 1187665 - 1187919 | 9764.04 |
| dna-binding response regulator | DW916_04800 | Not Available | Positive | 1188165 - 1188860 | 26342.8 |
| histidine kinase | DW916_04805 | Not Available | Positive | 1188866 - 1190326 | 55691.0 |
| susc/raga family tonb-linked outer membrane protein | DW916_04810 | Not Available | Positive | 1190752 - 1194060 | 123088.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_04815 | Not Available | Positive | 1194077 - 1195666 | 59760.6 |
| hypothetical protein | DW916_04820 | Not Available | Positive | 1195681 - 1196664 | 37379.0 |
| duf4302 domain-containing protein | DW916_04825 | Not Available | Positive | 1196672 - 1197982 | 48195.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
