Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | DW916_04530 | Not Available | Negative | 1093002 - 1094012 | 38299.5 |
| rna polymerase sigma-70 factor | DW916_04535 | Not Available | Negative | 1094054 - 1094611 | 21963.9 |
| ribonuclease h | DW916_04540 | Not Available | Negative | 1094724 - 1095197 | 17706.3 |
| arginine--trna ligase | DW916_04545 | Not Available | Negative | 1095351 - 1097171 | 68520.1 |
| rhamnogalacturonan lyase | DW916_04550 | Not Available | Positive | 1097520 - 1100141 | 95264.1 |
| hypothetical protein | DW916_04555 | Not Available | Negative | 1100292 - 1100483 | 6905.02 |
| response regulator | DW916_04560 | Not Available | Negative | 1100824 - 1104951 | 157028.0 |
| tonb-dependent receptor | DW916_04565 | Not Available | Positive | 1105172 - 1108447 | 120481.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_04570 | Not Available | Positive | 1108466 - 1110472 | 75101.6 |
| beta-glucanase | DW916_04575 | Not Available | Positive | 1110762 - 1111883 | 42521.7 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
