Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW916_04420 | Not Available | Negative | 1058261 - 1059898 | 62425.2 |
| hypothetical protein | DW916_04425 | Not Available | Positive | 1060090 - 1060461 | 13994.2 |
| abc transporter atp-binding protein | DW916_04430 | Not Available | Negative | 1061173 - 1061949 | 28424.3 |
| rida family protein | DW916_04435 | Not Available | Negative | 1062003 - 1062377 | 13171.6 |
| tonb-dependent receptor | DW916_04445 | Not Available | Positive | 1066748 - 1069822 | 112854.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW916_04450 | Not Available | Positive | 1069880 - 1071442 | 59319.1 |
| esterase | DW916_04455 | Not Available | Positive | 1071501 - 1072706 | 44453.4 |
| esterase | DW916_04460 | Not Available | Positive | 1072724 - 1073950 | 45681.5 |
| beta-glucosidase | DW916_04465 | Not Available | Positive | 1074012 - 1076357 | 85431.9 |
| threonine ammonia-lyase | DW916_04470 | Not Available | Negative | 1076497 - 1077696 | 42803.9 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
