Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW916_03905 | Not Available | Negative | 925469 - 927208 | 64807.2 |
| tonb-dependent receptor | DW916_03910 | Not Available | Negative | 927237 - 930416 | 116934.0 |
| hypothetical protein | DW916_03915 | Not Available | Negative | 930652 - 932298 | 61527.8 |
| alpha-glucuronidase | DW916_03920 | Not Available | Negative | 932291 - 934297 | 76208.4 |
| hybrid sensor histidine kinase/response regulator | DW916_03925 | Not Available | Negative | 934381 - 938301 | 148301.0 |
| sgnh/gdsl hydrolase family protein | DW916_03930 | Not Available | Positive | 938573 - 939760 | 43720.9 |
| sugar transporter | DW916_03935 | Not Available | Positive | 939826 - 941259 | 52848.6 |
| 1,4-beta-xylanase | DW916_03940 | Not Available | Positive | 941297 - 942421 | 42652.1 |
| alpha-n-arabinofuranosidase | DW916_03945 | Not Available | Positive | 942431 - 943393 | 36847.9 |
| hypothetical protein | DW916_03950 | Not Available | Positive | 943702 - 945072 | 52180.8 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
