Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | DXC61_01755 | Not Available | Positive | 459328 - 460596 | 48009.4 |
| alpha-amylase | DXC61_01760 | Not Available | Positive | 460682 - 462130 | 54887.2 |
| glycoside hydrolase | DXC61_01765 | Not Available | Negative | 462243 - 464033 | 67457.8 |
| hypothetical protein | DXC61_01770 | Not Available | Negative | 464055 - 466046 | 72268.5 |
| hypothetical protein | DXC61_01775 | Not Available | Negative | 466817 - 467122 | 11872.4 |
| duf5123 domain-containing protein | DXC61_01780 | Not Available | Negative | 467379 - 467498 | 4242.88 |
| duf5123 domain-containing protein | DXC61_01785 | Not Available | Negative | 467866 - 469434 | 56957.7 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_01790 | Not Available | Negative | 469456 - 471297 | 69329.9 |
| tonb-dependent receptor | DXC61_01795 | Not Available | Negative | 471317 - 474547 | 119114.0 |
| pectin esterase | DXC61_01800 | Not Available | Negative | 474981 - 478172 | 115126.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
