Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DXC61_01505 | Not Available | Negative | 408165 - 410180 | 75097.3 |
| site-specific integrase | DXC61_01510 | Not Available | Positive | 410431 - 411642 | 46209.4 |
| replication initiation protein | DXC61_01515 | Not Available | Positive | 412208 - 413329 | 43713.2 |
| duf4248 domain-containing protein | DXC61_01520 | Not Available | Positive | 413345 - 413572 | 8990.67 |
| hypothetical protein | DXC61_01525 | Not Available | Negative | 413769 - 414149 | 14501.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | DXC61_01530 | Not Available | Negative | 414206 - 414682 | 17043.5 |
| hypothetical protein | DXC61_01535 | Not Available | Negative | 414711 - 415406 | 24942.5 |
| dna replication/repair protein recf | DXC61_01540 | Not Available | Positive | 415616 - 416713 | 42237.8 |
| duf721 domain-containing protein | DXC61_01545 | Not Available | Positive | 416759 - 417049 | 11089.7 |
| 5-formyltetrahydrofolate cyclo-ligase | DXC61_01550 | Not Available | Negative | 417070 - 417615 | 21048.5 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
