Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DW916_00360 | Not Available | Positive | 94696 - 95646 | 36199.9 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DW916_00365 | Not Available | Positive | 95658 - 96392 | 27589.6 |
| shikimate dehydrogenase | DW916_00370 | Not Available | Positive | 96405 - 97151 | 28031.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | DW916_00375 | Not Available | Positive | 97211 - 98359 | 41965.4 |
| peptide chain release factor 1 | DW916_00380 | Not Available | Positive | 98466 - 99575 | 41564.7 |
| orotidine-5'-phosphate decarboxylase | DW916_00385 | Not Available | Positive | 99631 - 100473 | 31308.4 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DW916_00390 | Not Available | Positive | 100676 - 101710 | 37156.6 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DW916_00395 | Not Available | Positive | 101718 - 103106 | 51815.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW916_00400 | Not Available | Positive | 103122 - 103892 | 28095.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW916_00405 | Not Available | Positive | 103992 - 104891 | 34911.9 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
