Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | DW916_00075 | Not Available | Negative | 18612 - 19673 | 41717.3 |
| 50s ribosomal protein l25/general stress protein ctc | DW916_00080 | Not Available | Positive | 19958 - 20563 | 21935.7 |
| aminoacyl-trna hydrolase | DW916_00085 | Not Available | Positive | 20615 - 21187 | 21198.7 |
| rna-binding s4 domain-containing protein | DW916_00090 | Not Available | Positive | 21190 - 21612 | 16020.2 |
| port family protein | DW916_00095 | Not Available | Positive | 21940 - 22491 | 19551.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 23924 - 25460 | Not Available |
| tonb-dependent receptor | DW916_00100 | Not Available | Negative | 22649 - 25594 | 110178.0 |
| 3-dehydroquinate synthase | DW916_00105 | Not Available | Positive | 25812 - 26858 | 38850.9 |
| o-succinylbenzoic acid--coa ligase | DW916_00110 | Not Available | Negative | 26892 - 27875 | 36997.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 28913 - 29025 | Not Available |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
