Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC61_01450 | Not Available | Positive | 392523 - 393497 | 34910.8 |
| hypothetical protein | DXC61_01460 | Not Available | Negative | 396500 - 399046 | 93450.9 |
| polysaccharide lyase | DXC61_01465 | Not Available | Positive | 399286 - 401031 | 64437.3 |
| duf3826 domain-containing protein | DXC61_01470 | Not Available | Positive | 401092 - 401709 | 23757.8 |
| pectate lyase | DXC61_01475 | Not Available | Positive | 401840 - 404521 | 100654.0 |
| hypothetical protein | DXC61_01480 | Not Available | Positive | 404543 - 404809 | 10089.2 |
| sigma-70 family rna polymerase sigma factor | DXC61_01485 | Not Available | Positive | 404927 - 405499 | 22421.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DXC61_01490 | Not Available | Negative | 405660 - 406328 | 24840.6 |
| dj-1/pfpi family protein | DXC61_01495 | Not Available | Negative | 406396 - 406968 | 20599.6 |
| nad kinase | DXC61_01500 | Not Available | Positive | 407052 - 407942 | 32747.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
