Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | DXC61_01295 | Not Available | Negative | 329560 - 330135 | 21708.8 |
| yicc family protein | DXC61_01300 | Not Available | Negative | 330219 - 331097 | 33494.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DXC61_01305 | Not Available | Positive | 331189 - 331881 | 25249.6 |
| duf4290 domain-containing protein | DXC61_01310 | Not Available | Positive | 331911 - 332510 | 23153.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DXC61_01315 | Not Available | Positive | 332541 - 333851 | 47772.5 |
| 16s rrna processing protein rimm | DXC61_01320 | Not Available | Positive | 333883 - 334404 | 19643.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DXC61_01325 | Not Available | Positive | 334416 - 335576 | 42740.5 |
| rip metalloprotease rsep | DXC61_01330 | Not Available | Positive | 335679 - 337061 | 51972.6 |
| lysm peptidoglycan-binding domain-containing protein | DXC61_01335 | Not Available | Negative | 337311 - 338261 | 35351.1 |
| hypothetical protein | DXC61_01340 | Not Available | Negative | 338497 - 338817 | 12454.3 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
