Segatella copri

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri is a Gram-negative, anaerobic bacterium that inhabits the gastrointestinal tract of various hosts. This microbe is part of the complex microbial community within the gut, where it plays a role in the overall microbiota composition and metabolic processes. As an anaerobe, Segatella copri thrives in oxygen-depleted environments, which are characteristic of the intestinal niche. The Gram-negative nature of Segatella copri implies that its cellular structure includes a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the host's immune system and its resilience within the gut environment. Understanding the specific metabolic activities and interactions of Segatella copri within the gut microbiome could provide valuable insights into its potential roles in digestion, nutrient absorption, and overall gut health. The presence of this bacterium in the gut suggests a possible contribution to the maintenance of microbial diversity, which is crucial for a balanced and functional microbiome. Further research into Segatella copri could elucidate its specific contributions to gut ecology and its interactions with other microbial species, highlighting its significance in the complex interplay of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome

Gene Summary

Adenine Count

1014685 bp

Thymine Count

1018756 bp

Guanine Count

833043 bp

Cytosine Count

826587 bp

Genome Length

3693570 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinDXC61_13375Not AvailablePositive3238479 - 324027567432.7
tonb-dependent receptorDXC61_13380Not AvailablePositive3240351 - 3243548120003.0
ragb/susd family nutrient uptake outer membrane proteinDXC61_13385Not AvailablePositive3243570 - 324539669068.6
hypothetical proteinDXC61_13390Not AvailablePositive3245498 - 324818299047.9
arabinan endo-1,5-alpha-l-arabinosidaseDXC61_13395Not AvailablePositive3248286 - 324925736209.9
alpha-amylaseDXC61_13400Not AvailableNegative3249653 - 325138064727.2
glycoside hydrolase family 97 proteinDXC61_13405Not AvailableNegative3251447 - 325354978845.3
ragb/susd family nutrient uptake outer membrane proteinDXC61_13410Not AvailableNegative3253579 - 325530664565.5
susc/raga family tonb-linked outer membrane proteinDXC61_13415Not AvailableNegative3255378 - 3258353109377.0
hypothetical proteinDXC61_13420Not AvailablePositive3258582 - 326021963509.8

Displaying genes 2591 – 2600 of 18638 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.