Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC61_13270 | Not Available | Positive | 3201364 - 3203160 | 67855.7 |
| chromophore lyase | DXC61_13275 | Not Available | Positive | 3203280 - 3205796 | 95275.7 |
| acetylxylan esterase | DXC61_13280 | Not Available | Positive | 3205810 - 3206514 | 26608.7 |
| glycoside hydrolase | DXC61_13285 | Not Available | Positive | 3206535 - 3208025 | 55363.5 |
| duf5110 domain-containing protein | DXC61_13290 | Not Available | Positive | 3208092 - 3210629 | 97093.5 |
| glycoside hydrolase family 3 protein | DXC61_13295 | Not Available | Positive | 3210744 - 3213350 | 97692.4 |
| hypothetical protein | DXC61_13300 | Not Available | Positive | 3213592 - 3215223 | 61804.1 |
| hypothetical protein | DXC61_13310 | Not Available | Positive | 3216032 - 3216298 | 9610.12 |
| hypothetical protein | DXC61_13315 | Not Available | Positive | 3216302 - 3216733 | 17181.4 |
| tetratricopeptide repeat protein | DXC61_13320 | Not Available | Positive | 3217207 - 3217736 | 20499.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
