Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC61_13220 | Not Available | Positive | 3182661 - 3184595 | 73240.4 |
| susc/raga family tonb-linked outer membrane protein | DXC61_13225 | Not Available | Positive | 3184635 - 3187502 | 106372.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_13230 | Not Available | Positive | 3187525 - 3189339 | 68083.5 |
| duf1735 domain-containing protein | DXC61_13235 | Not Available | Positive | 3189351 - 3190424 | 39153.2 |
| glycosyl hydrolase family 10 | DXC61_13240 | Not Available | Positive | 3190473 - 3192641 | 81231.5 |
| helix-turn-helix domain-containing protein | DXC61_13245 | Not Available | Positive | 3192919 - 3193221 | 11536.3 |
| type ii toxin-antitoxin system hipa family toxin | DXC61_13250 | Not Available | Positive | 3193238 - 3194728 | 57137.4 |
| hypothetical protein | DXC61_13255 | Not Available | Positive | 3195033 - 3195218 | 6571.27 |
| acetyl xylan esterase | DXC61_13260 | Not Available | Negative | 3195974 - 3197884 | 71590.9 |
| tonb-dependent receptor | DXC61_13265 | Not Available | Positive | 3198258 - 3201344 | 112842.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
