Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DXC61_13070 | Not Available | Negative | 3143894 - 3146371 | 92792.2 |
| gscfa family protein | DXC61_13075 | Not Available | Negative | 3146424 - 3147245 | 31691.8 |
| hypothetical protein | DXC61_13080 | Not Available | Negative | 3147296 - 3149785 | 93819.0 |
| port family protein | DXC61_13085 | Not Available | Positive | 3150004 - 3150702 | 26250.2 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DXC61_13090 | Not Available | Positive | 3150987 - 3151685 | 25845.2 |
| s-ribosylhomocysteine lyase | DXC61_13095 | Not Available | Positive | 3151709 - 3152194 | 18611.5 |
| transporter | DXC61_13100 | Not Available | Negative | 3152215 - 3153177 | 35799.5 |
| translational gtpase typa | DXC61_13105 | Not Available | Negative | 3153184 - 3154986 | 67637.1 |
| 30s ribosomal protein s15 | DXC61_13110 | Not Available | Positive | 3155171 - 3155440 | 10416.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DXC61_13115 | Not Available | Negative | 3155660 - 3156067 | 15799.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
