Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-structural protein ns-s | DXC61_11440 | Not Available | Negative | 2786658 - 2786774 | 4476.46 |
| putative toxin-antitoxin system toxin component, pin family | DXC61_11445 | Not Available | Negative | 2787061 - 2787495 | 16564.1 |
| hypothetical protein | DXC61_11450 | Not Available | Negative | 2787492 - 2787773 | 10737.9 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | DXC61_11455 | Not Available | Positive | 2788202 - 2788528 | 12314.7 |
| putative toxin-antitoxin system toxin component, pin family | DXC61_11460 | Not Available | Positive | 2788509 - 2788916 | 15471.5 |
| duf1016 family protein | DXC61_11465 | Not Available | Negative | 2788965 - 2789330 | 14092.1 |
| hypothetical protein | DXC61_11470 | Not Available | Negative | 2789555 - 2789860 | 11705.4 |
| hypothetical protein | DXC61_11475 | Not Available | Negative | 2789857 - 2790111 | 9677.58 |
| protein tyrosine phosphatase | DXC61_11480 | Not Available | Negative | 2790325 - 2790480 | 6088.41 |
| duf3575 domain-containing protein | DXC61_11485 | Not Available | Positive | 2791072 - 2791644 | 21582.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
