Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DXC61_11380 | Not Available | Negative | 2769648 - 2771519 | 69861.8 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DXC61_11385 | Not Available | Positive | 2771751 - 2772434 | 25426.8 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DXC61_11390 | Not Available | Positive | 2772467 - 2774449 | 73451.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DXC61_11395 | Not Available | Positive | 2774465 - 2775223 | 27639.1 |
| carboxylesterase | DXC61_11405 | Not Available | Negative | 2777622 - 2779163 | 57162.1 |
| n-acetyltransferase | DXC61_11415 | Not Available | Positive | 2779739 - 2780890 | 44648.8 |
| type iia dna topoisomerase subunit b | DXC61_11420 | Not Available | Positive | 2781022 - 2782998 | 74937.5 |
| s41 family peptidase | DXC61_11425 | Not Available | Positive | 2783135 - 2784718 | 59038.7 |
| is3 family transposase | DXC61_11430 | Not Available | Negative | 2785073 - 2786026 | 37615.7 |
| hypothetical protein | DXC61_11435 | Not Available | Negative | 2786032 - 2786379 | 13505.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
