Segatella copri

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri is a Gram-negative, anaerobic bacterium that inhabits the gastrointestinal tract of various hosts. This microbe is part of the complex microbial community within the gut, where it plays a role in the overall microbiota composition and metabolic processes. As an anaerobe, Segatella copri thrives in oxygen-depleted environments, which are characteristic of the intestinal niche. The Gram-negative nature of Segatella copri implies that its cellular structure includes a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the host's immune system and its resilience within the gut environment. Understanding the specific metabolic activities and interactions of Segatella copri within the gut microbiome could provide valuable insights into its potential roles in digestion, nutrient absorption, and overall gut health. The presence of this bacterium in the gut suggests a possible contribution to the maintenance of microbial diversity, which is crucial for a balanced and functional microbiome. Further research into Segatella copri could elucidate its specific contributions to gut ecology and its interactions with other microbial species, highlighting its significance in the complex interplay of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome

Gene Summary

Adenine Count

1014685 bp

Thymine Count

1018756 bp

Guanine Count

833043 bp

Cytosine Count

826587 bp

Genome Length

3693570 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgDXC61_11380Not AvailableNegative2769648 - 277151969861.8
succinate dehydrogenase/fumarate reductase cytochrome b subunitDXC61_11385Not AvailablePositive2771751 - 277243425426.8
fumarate reductase/succinate dehydrogenase flavoprotein subunitDXC61_11390Not AvailablePositive2772467 - 277444973451.5
succinate dehydrogenase/fumarate reductase iron-sulfur subunitDXC61_11395Not AvailablePositive2774465 - 277522327639.1
carboxylesteraseDXC61_11405Not AvailableNegative2777622 - 277916357162.1
n-acetyltransferaseDXC61_11415Not AvailablePositive2779739 - 278089044648.8
type iia dna topoisomerase subunit bDXC61_11420Not AvailablePositive2781022 - 278299874937.5
s41 family peptidaseDXC61_11425Not AvailablePositive2783135 - 278471859038.7
is3 family transposaseDXC61_11430Not AvailableNegative2785073 - 278602637615.7
hypothetical proteinDXC61_11435Not AvailableNegative2786032 - 278637913505.4

Displaying genes 2211 – 2220 of 18638 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.