Segatella copri

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri is a Gram-negative, anaerobic bacterium that inhabits the gastrointestinal tract of various hosts. This microbe is part of the complex microbial community within the gut, where it plays a role in the overall microbiota composition and metabolic processes. As an anaerobe, Segatella copri thrives in oxygen-depleted environments, which are characteristic of the intestinal niche. The Gram-negative nature of Segatella copri implies that its cellular structure includes a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the host's immune system and its resilience within the gut environment. Understanding the specific metabolic activities and interactions of Segatella copri within the gut microbiome could provide valuable insights into its potential roles in digestion, nutrient absorption, and overall gut health. The presence of this bacterium in the gut suggests a possible contribution to the maintenance of microbial diversity, which is crucial for a balanced and functional microbiome. Further research into Segatella copri could elucidate its specific contributions to gut ecology and its interactions with other microbial species, highlighting its significance in the complex interplay of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome

Gene Summary

Adenine Count

1014685 bp

Thymine Count

1018756 bp

Guanine Count

833043 bp

Cytosine Count

826587 bp

Genome Length

3693570 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glpgli family proteinDXC61_10650Not AvailableNegative2591986 - 259281630818.6
leucine-rich repeat domain-containing proteinDXC61_10655Not AvailableNegative2592846 - 259363730023.5
nucleotidyl transferase abieii/abigii toxin family proteinDXC61_10660Not AvailableNegative2593696 - 259456233611.6
hypothetical proteinDXC61_10665Not AvailableNegative2594564 - 259514522146.2
tolc family proteinDXC61_10670Not AvailableNegative2595555 - 259688949306.6
homoserine o-succinyltransferaseDXC61_10675Not AvailablePositive2597240 - 259815736072.4
u32 family peptidaseDXC61_10680Not AvailablePositive2598194 - 260025778334.7
zinc ribbon domain-containing proteinDXC61_10685Not AvailablePositive2600258 - 260118435441.7
tonb-dependent receptorDXC61_10690Not AvailablePositive2601227 - 260360889403.4
duf5103 domain-containing proteinDXC61_10695Not AvailableNegative2603686 - 260493048533.9

Displaying genes 2071 – 2080 of 18638 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.