Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | DXC61_09560 | Not Available | Positive | 2354515 - 2355297 | 27680.7 |
| xre family transcriptional regulator | DXC61_09565 | Not Available | Positive | 2355494 - 2356048 | 21103.3 |
| acetyl-coa synthetase | DXC61_09570 | Not Available | Positive | 2356059 - 2357717 | 63541.8 |
| glutamate 5-kinase | DXC61_09575 | Not Available | Positive | 2357787 - 2358563 | 28937.9 |
| hybrid sensor histidine kinase/response regulator | DXC61_09580 | Not Available | Negative | 2358608 - 2362624 | 151293.0 |
| beta-xylosidase | DXC61_09585 | Not Available | Positive | 2362804 - 2363817 | 37992.5 |
| hypothetical protein | DXC61_09590 | Not Available | Positive | 2363837 - 2365846 | 76341.3 |
| tonb-dependent receptor | DXC61_09595 | Not Available | Positive | 2365864 - 2369229 | 125016.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_09600 | Not Available | Positive | 2369261 - 2371096 | 70858.5 |
| arabinan endo-1,5-alpha-l-arabinosidase | DXC61_09605 | Not Available | Positive | 2371124 - 2372158 | 38383.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
