Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin/lipoyl-binding protein | DXC61_09300 | Not Available | Positive | 2280870 - 2281853 | 36125.3 |
| abc transporter permease | DXC61_09305 | Not Available | Positive | 2281859 - 2283022 | 43445.5 |
| abc transporter permease | DXC61_09310 | Not Available | Positive | 2283022 - 2284284 | 47518.0 |
| mrp family atp-binding protein | DXC61_09315 | Not Available | Negative | 2284432 - 2285529 | 39394.0 |
| hypothetical protein | DXC61_09320 | Not Available | Positive | 2285643 - 2287832 | 82145.8 |
| branched-chain amino acid aminotransferase | DXC61_09325 | Not Available | Negative | 2288346 - 2289362 | 38296.6 |
| carbohydrate kinase | DXC61_09330 | Not Available | Negative | 2289675 - 2290565 | 32441.8 |
| mfs transporter | DXC61_09335 | Not Available | Negative | 2290613 - 2291764 | 41691.8 |
| duf4980 domain-containing protein | DXC61_09340 | Not Available | Negative | 2291928 - 2293646 | 64416.1 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_09345 | Not Available | Negative | 2293685 - 2295421 | 66849.1 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
