Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DWW35_12545 | Not Available | Negative | 3007700 - 3008038 | 13365.4 |
| had family phosphatase | DWW35_12550 | Not Available | Negative | 3008112 - 3008714 | 23789.4 |
| fecr family protein | DWW35_12555 | Not Available | Negative | 3008835 - 3009845 | 38326.7 |
| rna polymerase sigma-70 factor | DWW35_12560 | Not Available | Negative | 3009887 - 3010444 | 21963.9 |
| ribonuclease h | DWW35_12565 | Not Available | Negative | 3010557 - 3011030 | 17679.3 |
| arginine--trna ligase | DWW35_12570 | Not Available | Negative | 3011184 - 3013004 | 68534.1 |
| rhamnogalacturonan lyase | DWW35_12575 | Not Available | Positive | 3013353 - 3015974 | 95318.2 |
| hypothetical protein | DWW35_12580 | Not Available | Negative | 3016125 - 3016316 | 6905.02 |
| response regulator | DWW35_12585 | Not Available | Negative | 3016657 - 3020784 | 157043.0 |
| tonb-dependent receptor | DWW35_12590 | Not Available | Positive | 3021005 - 3024280 | 120481.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
