Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW35_12495 | Not Available | Negative | 2987059 - 2988864 | 67696.8 |
| susc/raga family tonb-linked outer membrane protein | DWW35_12500 | Not Available | Negative | 2988887 - 2991754 | 106416.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW35_12505 | Not Available | Negative | 2991794 - 2993728 | 73287.4 |
| tonb-dependent receptor | DWW35_12510 | Not Available | Negative | 2993778 - 2996924 | 116668.0 |
| hypothetical protein | DWW35_12515 | Not Available | Negative | 2997046 - 2998518 | 55889.4 |
| hybrid sensor histidine kinase/response regulator | DWW35_12520 | Not Available | Positive | 2999017 - 3003075 | 152684.0 |
| glycoside hydrolase family 43 protein | DWW35_12525 | Not Available | Positive | 3003283 - 3004953 | 62016.6 |
| hypothetical protein | DWW35_12530 | Not Available | Positive | 3005300 - 3005929 | 24284.7 |
| hypothetical protein | DWW35_12535 | Not Available | Positive | 3006049 - 3006699 | 25121.3 |
| xre family transcriptional regulator | DWW35_12540 | Not Available | Negative | 3007386 - 3007697 | 11662.2 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
