Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolygalacturonase | DWW35_12345 | Not Available | Positive | 2948162 - 2949553 | 51864.0 |
| abc transporter atp-binding protein | DWW35_12350 | Not Available | Positive | 2949728 - 2950477 | 26974.1 |
| gntr family transcriptional regulator | DWW35_12355 | Not Available | Positive | 2950624 - 2951466 | 32423.8 |
| aaa family atpase | DWW35_12360 | Not Available | Negative | 2951607 - 2953169 | 59862.0 |
| xre family transcriptional regulator | DWW35_12365 | Not Available | Positive | 2953497 - 2953718 | 8362.32 |
| orf6n domain-containing protein | DWW35_12370 | Not Available | Positive | 2953739 - 2954650 | 35045.0 |
| snf2/rad54 family helicase | DWW35_12375 | Not Available | Positive | 2954692 - 2958021 | 128822.0 |
| restriction endonuclease | DWW35_12380 | Not Available | Positive | 2958032 - 2961385 | 128401.0 |
| hypothetical protein | DWW35_12385 | Not Available | Negative | 2961378 - 2961758 | 15035.3 |
| class i sam-dependent dna methyltransferase | DWW35_12390 | Not Available | Negative | 2961783 - 2962646 | 33157.5 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
