Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transporter | DWW35_08735 | Not Available | Negative | 2068398 - 2069741 | 49398.5 |
| glycosidase | DWW35_08740 | Not Available | Negative | 2069871 - 2071043 | 44284.4 |
| beta-mannosidase | DWW35_08745 | Not Available | Negative | 2071132 - 2072235 | 41222.1 |
| acetylxylan esterase | DWW35_08750 | Not Available | Negative | 2072297 - 2073637 | 50290.9 |
| tonb-dependent receptor | DWW35_08755 | Not Available | Positive | 2074359 - 2077667 | 121265.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW35_08760 | Not Available | Positive | 2077693 - 2079489 | 67665.3 |
| hypothetical protein | DWW35_08765 | Not Available | Positive | 2079548 - 2080822 | 47537.5 |
| polygalacturonase | DWW35_08770 | Not Available | Positive | 2080894 - 2082897 | 71390.7 |
| t9ss c-terminal target domain-containing protein | DWW35_08775 | Not Available | Positive | 2083012 - 2083467 | 16349.8 |
| b-1,4-endoglucanase | DWW35_08780 | Not Available | Positive | 2083464 - 2085824 | 88623.3 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
