Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DWW35_04330 | Not Available | Negative | 993520 - 995751 | 82546.5 |
| xre family transcriptional regulator | DWW35_04335 | Not Available | Negative | 996205 - 996516 | 11804.5 |
| alpha-amlyase | DWW35_04340 | Not Available | Negative | 997540 - 999732 | 84182.6 |
| [acyl-carrier-protein] s-malonyltransferase | DWW35_04345 | Not Available | Negative | 999822 - 1000709 | 30956.2 |
| 50s ribosomal protein l9 | DWW35_04350 | Not Available | Negative | 1000994 - 1001524 | 18579.4 |
| 30s ribosomal protein s18 | DWW35_04355 | Not Available | Negative | 1001545 - 1001814 | 10529.1 |
| 30s ribosomal protein s6 | DWW35_04360 | Not Available | Negative | 1001817 - 1002161 | 13177.0 |
| hypothetical protein | DWW35_04365 | Not Available | Positive | 1002351 - 1002548 | 6897.96 |
| dna-binding response regulator | DWW35_04370 | Not Available | Negative | 1002609 - 1003307 | 26861.7 |
| sensor histidine kinase | DWW35_04375 | Not Available | Negative | 1003367 - 1004860 | 57648.7 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
