Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DWW35_03365 | Not Available | Positive | 749767 - 751692 | 73151.8 |
| hypothetical protein | DWW35_03370 | Not Available | Positive | 751875 - 752072 | 7490.28 |
| helix-turn-helix domain-containing protein | DWW35_03375 | Not Available | Positive | 752388 - 755378 | 111641.0 |
| tonb-dependent receptor | DWW35_03380 | Not Available | Positive | 755760 - 758963 | 117898.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWW35_03385 | Not Available | Positive | 759016 - 760773 | 66106.9 |
| hypothetical protein | DWW35_03390 | Not Available | Positive | 760859 - 762682 | 65798.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW35_03395 | Not Available | Positive | 762809 - 764470 | 61411.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | DWW35_03400 | Not Available | Positive | 764595 - 765605 | 37711.7 |
| abi family protein | DWW35_03405 | Not Available | Negative | 766187 - 767194 | 39229.6 |
| atp-binding protein | DWW35_03410 | Not Available | Positive | 767519 - 768964 | 55737.8 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
