Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5115 domain-containing protein | DWW35_03315 | Not Available | Negative | 732244 - 733770 | 55243.4 |
| susf/suse family outer membrane protein | DWW35_03320 | Not Available | Negative | 733841 - 735001 | 42328.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWW35_03325 | Not Available | Negative | 735029 - 736669 | 60856.1 |
| tonb-dependent receptor | DWW35_03330 | Not Available | Negative | 736691 - 739747 | 112277.0 |
| hypothetical protein | DWW35_03335 | Not Available | Negative | 739786 - 740001 | 8484.38 |
| laci family transcriptional regulator | DWW35_03340 | Not Available | Positive | 740090 - 741115 | 38237.9 |
| mfs transporter | DWW35_03345 | Not Available | Positive | 741137 - 742471 | 48552.9 |
| 4-alpha-glucanotransferase | DWW35_03350 | Not Available | Positive | 742650 - 745325 | 103890.0 |
| glycoside hydrolase family 97 protein | DWW35_03355 | Not Available | Positive | 745505 - 747640 | 80861.7 |
| type i pullulanase | DWW35_03360 | Not Available | Positive | 747772 - 749742 | 73768.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
