Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | DWW35_02285 | Not Available | Negative | 503344 - 504543 | 44210.1 |
| tryptophan synthase subunit alpha | DWW35_02290 | Not Available | Negative | 504621 - 505397 | 28300.4 |
| phosphoribosylanthranilate isomerase | DWW35_02295 | Not Available | Negative | 505425 - 506045 | 23024.8 |
| indole-3-glycerol phosphate synthase trpc | DWW35_02300 | Not Available | Negative | 506204 - 507010 | 30400.8 |
| anthranilate phosphoribosyltransferase | DWW35_02305 | Not Available | Negative | 507151 - 508149 | 36430.8 |
| ribulose-phosphate 3-epimerase | DWW35_02310 | Not Available | Positive | 508874 - 509527 | 23835.2 |
| sigma-70 family rna polymerase sigma factor | DWW35_02315 | Not Available | Negative | 509524 - 510120 | 23014.7 |
| glycoside hydrolase | DWW35_02320 | Not Available | Positive | 510404 - 513028 | 99285.5 |
| pectate lyase | DWW35_02325 | Not Available | Positive | 513117 - 514880 | 64425.7 |
| hypothetical protein | DWW35_02330 | Not Available | Negative | 514954 - 515652 | 24353.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
