Segatella copri

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri is a Gram-negative, anaerobic bacterium that inhabits the gastrointestinal tract of various hosts. This microbe is part of the complex microbial community within the gut, where it plays a role in the overall microbiota composition and metabolic processes. As an anaerobe, Segatella copri thrives in oxygen-depleted environments, which are characteristic of the intestinal niche. The Gram-negative nature of Segatella copri implies that its cellular structure includes a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature may influence its interactions with the host's immune system and its resilience within the gut environment. Understanding the specific metabolic activities and interactions of Segatella copri within the gut microbiome could provide valuable insights into its potential roles in digestion, nutrient absorption, and overall gut health. The presence of this bacterium in the gut suggests a possible contribution to the maintenance of microbial diversity, which is crucial for a balanced and functional microbiome. Further research into Segatella copri could elucidate its specific contributions to gut ecology and its interactions with other microbial species, highlighting its significance in the complex interplay of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome

Gene Summary

Adenine Count

1014685 bp

Thymine Count

1018756 bp

Guanine Count

833043 bp

Cytosine Count

826587 bp

Genome Length

3693570 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4435 domain-containing proteinDXC61_06755Not AvailablePositive1653587 - 165458539649.8
mannose-6-phosphate isomeraseDXC61_06765Not AvailableNegative1654731 - 165569336219.1
trkh family potassium uptake proteinDXC61_06770Not AvailableNegative1655881 - 165733854063.8
trk system potassium transporter trkaDXC61_06775Not AvailableNegative1657369 - 165871249437.5
1-deoxy-d-xylulose-5-phosphate synthaseDXC61_06780Not AvailableNegative1658709 - 166060169979.2
aminopeptidaseDXC61_06785Not AvailablePositive1660780 - 166218653020.1
serine dehydratase subunit alpha family proteinDXC61_06790Not AvailablePositive1662312 - 166359545507.4
duf4143 domain-containing proteinDXC61_06795Not AvailablePositive1664097 - 166544952606.9
diaminopimelate dehydrogenaseDXC61_06800Not AvailableNegative1665557 - 166645632540.3
heat repeat domain-containing proteinDXC61_06805Not AvailableNegative1666894 - 166723512795.6

Displaying genes 1321 – 1330 of 18638 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.