Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding transcriptional accessory protein | DXC61_06550 | Not Available | Negative | 1601071 - 1603203 | 79283.3 |
| porin family protein | DXC61_06555 | Not Available | Positive | 1603569 - 1604102 | 18858.6 |
| atp-binding protein | DXC61_06560 | Not Available | Positive | 1604910 - 1605503 | 22485.0 |
| duf4302 domain-containing protein | DXC61_06565 | Not Available | Negative | 1606167 - 1607477 | 48195.4 |
| hypothetical protein | DXC61_06570 | Not Available | Negative | 1607485 - 1608468 | 37505.1 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_06575 | Not Available | Negative | 1608483 - 1610072 | 59759.6 |
| susc/raga family tonb-linked outer membrane protein | DXC61_06580 | Not Available | Negative | 1610089 - 1613409 | 123712.0 |
| histidine kinase | DXC61_06585 | Not Available | Negative | 1613824 - 1615284 | 55754.0 |
| dna-binding response regulator | DXC61_06590 | Not Available | Negative | 1615290 - 1615985 | 26372.8 |
| nadp-dependent isocitrate dehydrogenase | DXC61_06595 | Not Available | Negative | 1616432 - 1617643 | 45538.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
