Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chondroitin lyase | DXC61_06340 | Not Available | Negative | 1542457 - 1544655 | 83098.7 |
| poly(beta-d-mannuronate) lyase | DXC61_06345 | Not Available | Negative | 1544657 - 1546819 | 79015.2 |
| dna-binding protein | DXC61_06350 | Not Available | Negative | 1546844 - 1548439 | 58171.5 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_06355 | Not Available | Negative | 1548537 - 1550045 | 56701.7 |
| tonb-dependent receptor | DXC61_06360 | Not Available | Negative | 1550061 - 1553213 | 116060.0 |
| fadr family transcriptional regulator | DXC61_06365 | Not Available | Positive | 1553586 - 1554275 | 26325.7 |
| hypothetical protein | DXC61_06370 | Not Available | Positive | 1554502 - 1555173 | 24366.0 |
| hypothetical protein | DXC61_06375 | Not Available | Negative | 1555198 - 1555452 | 9684.44 |
| hypothetical protein | DXC61_06385 | Not Available | Positive | 1556130 - 1556519 | 14248.3 |
| adp-ribosylglycohydrolase | DXC61_06390 | Not Available | Positive | 1556542 - 1557336 | 29430.4 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
