Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Segatella copri strain TF06-40 TF06-40.Scaf100, whole genome
Gene Summary
Adenine Count
1014685 bp
Thymine Count
1018756 bp
Guanine Count
833043 bp
Cytosine Count
826587 bp
Genome Length
3693570 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | DXC61_05200 | Not Available | Positive | 1261816 - 1264158 | 82872.0 |
| hypothetical protein | DXC61_05205 | Not Available | Positive | 1264281 - 1265852 | 57661.9 |
| arabinogalactan endo-1,4-beta-galactosidase | DXC61_05210 | Not Available | Positive | 1266032 - 1267117 | 40381.7 |
| duf4982 domain-containing protein | DXC61_05215 | Not Available | Positive | 1267159 - 1269585 | 91224.1 |
| helix-turn-helix domain-containing protein | DXC61_05220 | Not Available | Positive | 1269724 - 1272621 | 108475.0 |
| tonb-dependent receptor | DXC61_05225 | Not Available | Positive | 1273170 - 1276106 | 108985.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC61_05230 | Not Available | Positive | 1276125 - 1277651 | 58322.3 |
| duf4984 domain-containing protein | DXC61_05235 | Not Available | Positive | 1277667 - 1278569 | 33924.2 |
| duf5003 domain-containing protein | DXC61_05240 | Not Available | Positive | 1278623 - 1280215 | 58575.1 |
| duf4458 domain-containing protein | DXC61_05245 | Not Available | Positive | 1280215 - 1282899 | 100348.0 |
Pathways
174 pathways
Health Effects
No health effects information available for this bacterium.
