Weissella cibaria str. CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative, facultative anaerobic bacterium commonly found in diverse habitats, including fermented foods such as Korean kimchi, as well as in natural environments like pasture, soil, and tropical fruits. This organism has been identified in various ecological niches, indicating its adaptability and potential role in fermentation processes and microbial communities. W. cibaria str. CH2's presence in Korean kimchi suggests a contribution to the fermentation process, possibly enhancing flavor profiles and extending shelf life through its metabolic activities. Additionally, its detection in saliva and on tropical fruits points to its versatility and interaction with different substrates, which may facilitate its survival and proliferation in varying environmental conditions. The bacterium's facultative anaerobic nature allows it to thrive in both oxygen-rich and oxygen-poor environments, which is advantageous for colonization in diverse habitats. This trait may also reflect its ability to engage in various metabolic pathways, potentially involving the fermentation of carbohydrates and other organic compounds. Overall, Weissella cibaria str. CH2 exemplifies a microbe that not only plays a significant role in food fermentation but also contributes to the complex microbial ecosystems found in natural environments, highlighting its ecological significance and potential applications in food science and biotechnology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
StrainCH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain CH2 plasmid pMKC07, complete sequence.

Gene Summary

Adenine Count

843 bp

Thymine Count

802 bp

Guanine Count

676 bp

Cytosine Count

540 bp

Genome Length

2861 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lcp family proteinAO080_RS00950Not AvailableNegative205324 - 20644840733.5
hypothetical proteinAO080_RS00955Not AvailableNegative206519 - 20714223303.0
hamp domain-containing sensor histidine kinaseAO080_RS00960Not AvailableNegative207139 - 20853952047.0
response regulator transcription factorAO080_RS00965Not AvailableNegative208536 - 20920425341.7
peptide-methionine (s)-s-oxide reductase msraAO080_RS00970Not AvailablePositive209334 - 20985820009.3
hypothetical proteinAO080_RS00975Not AvailableNegative209898 - 2100957296.91
pts sugar transporter subunit iibAO080_RS00980Not AvailablePositive210291 - 21060511453.8
helix-turn-helix transcriptional regulatorAO080_RS12835Not AvailableNegative210691 - 21110115945.3
cupin domain-containing proteinAO080_RS12840Not AvailableNegative211141 - 21154215668.7
alpha-xylosidaseAO080_RS00990Not AvailableNegative211608 - 21372579908.6

Displaying genes 411 – 420 of 2556 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.