Weissella cibaria str. CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative, facultative anaerobic bacterium commonly found in diverse habitats, including fermented foods such as Korean kimchi, as well as in natural environments like pasture, soil, and tropical fruits. This organism has been identified in various ecological niches, indicating its adaptability and potential role in fermentation processes and microbial communities. W. cibaria str. CH2's presence in Korean kimchi suggests a contribution to the fermentation process, possibly enhancing flavor profiles and extending shelf life through its metabolic activities. Additionally, its detection in saliva and on tropical fruits points to its versatility and interaction with different substrates, which may facilitate its survival and proliferation in varying environmental conditions. The bacterium's facultative anaerobic nature allows it to thrive in both oxygen-rich and oxygen-poor environments, which is advantageous for colonization in diverse habitats. This trait may also reflect its ability to engage in various metabolic pathways, potentially involving the fermentation of carbohydrates and other organic compounds. Overall, Weissella cibaria str. CH2 exemplifies a microbe that not only plays a significant role in food fermentation but also contributes to the complex microbial ecosystems found in natural environments, highlighting its ecological significance and potential applications in food science and biotechnology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
StrainCH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain CH2 plasmid pMKC03, complete sequence.

Gene Summary

Adenine Count

6454 bp

Thymine Count

7922 bp

Guanine Count

4055 bp

Cytosine Count

4499 bp

Genome Length

22930 bp

Protein-coding Genes

25 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiation factor domain-containing proteinAO080_RS12265Not AvailablePositive452 - 130033016.0
hypothetical proteinAO080_RS12270Not AvailablePositive1941 - 247720622.4
is30-like element islpl1 family transposaseAO080_RS12235Not AvailableNegative363 - 129235908.9
abc transporter permeaseAO080_RS12240Not AvailablePositive1505 - 233830567.1
abc transporter permeaseAO080_RS12245Not AvailablePositive2331 - 311929111.0
abc transporter atp-binding proteinAO080_RS12250Not AvailablePositive3130 - 417339267.2
abc transporter substrate-binding proteinAO080_RS12255Not AvailablePositive4219 - 522336547.7
crp/fnr family transcriptional regulatorAO080_RS12375Not AvailableNegative27 - 67723986.3
crp/fnr family transcriptional regulatorAO080_RS11735Not AvailablePositive2156 - 330741229.8
crp/fnr family transcriptional regulatorAO080_RS11740Not AvailablePositive4107 - 489628053.1

Displaying genes 1 – 10 of 2556 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.