Weissella cibaria str. CH2

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria strain CH2 is a Gram-negative, facultative anaerobic bacterium commonly found in diverse habitats, including fermented foods such as Korean kimchi, as well as in natural environments like pasture, soil, and tropical fruits. This organism has been identified in various ecological niches, indicating its adaptability and potential role in fermentation processes and microbial communities. W. cibaria str. CH2's presence in Korean kimchi suggests a contribution to the fermentation process, possibly enhancing flavor profiles and extending shelf life through its metabolic activities. Additionally, its detection in saliva and on tropical fruits points to its versatility and interaction with different substrates, which may facilitate its survival and proliferation in varying environmental conditions. The bacterium's facultative anaerobic nature allows it to thrive in both oxygen-rich and oxygen-poor environments, which is advantageous for colonization in diverse habitats. This trait may also reflect its ability to engage in various metabolic pathways, potentially involving the fermentation of carbohydrates and other organic compounds. Overall, Weissella cibaria str. CH2 exemplifies a microbe that not only plays a significant role in food fermentation but also contributes to the complex microbial ecosystems found in natural environments, highlighting its ecological significance and potential applications in food science and biotechnology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
StrainCH2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Homo sapiens, Brassica oleracea var. capitata, Vicia faba
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria strain CH2 plasmid pMKC07, complete sequence.

Gene Summary

Adenine Count

843 bp

Thymine Count

802 bp

Guanine Count

676 bp

Cytosine Count

540 bp

Genome Length

2861 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar-phosphataseAO080_RS00655Not AvailableNegative136887 - 13772330516.1
hd domain-containing proteinAO080_RS00660Not AvailableNegative137769 - 13912751627.5
duf1934 domain-containing proteinAO080_RS00665Not AvailablePositive139233 - 13967016022.7
s1c family serine proteaseAO080_RS00670Not AvailableNegative140007 - 14129943971.3
mbl fold metallo-hydrolaseAO080_RS00675Not AvailableNegative141384 - 14218429380.5
two-component system regulatory protein yyciAO080_RS00680Not AvailableNegative142286 - 14309830290.9
two-component system activity regulator yychAO080_RS00685Not AvailableNegative143098 - 14442349845.1
cell wall metabolism sensor histidine kinase walkAO080_RS00690Not AvailableNegative144416 - 14629369917.1
response regulator yycfAO080_RS00695Not AvailableNegative146420 - 14712126560.9
Trna-lysNot AvailableNot AvailablePositive147310 - 147382Not Available

Displaying genes 351 – 360 of 2556 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.