Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. morsprunorum |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Prunus, Prunus avium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1254372 bp
Thymine Count
1260729 bp
Guanine Count
1789664 bp
Cytosine Count
1773097 bp
Genome Length
6101267 bp
Protein-coding Genes
5352 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ALQ94_03996 | Not Available | Negative | 331003 - 331512 | 18426.9 |
| Dna-binding protein | ALQ94_03997 | Not Available | Negative | 331512 - 331712 | 7054.56 |
| Helix-turn-helix transcriptional regulator | ALQ94_102247 | Not Available | Positive | 331805 - 332152 | 12666.0 |
| hypothetical protein | ALQ94_101616 | Not Available | Positive | 332250 - 332426 | 6832.12 |
| Hypothetical protein | ALQ94_100614 | Not Available | Negative | 332493 - 332753 | 9863.89 |
| Portal protein | ALQ94_03998 | Not Available | Negative | 332829 - 333581 | 28207.4 |
| Putative terminase atpase subunit | ALQ94_03999 | Not Available | Negative | 333607 - 335661 | 77888.0 |
| Gpo family capsid scaffolding protein | ALQ94_04000 | Not Available | Positive | 335823 - 336755 | 33477.6 |
| Major capsid protein | ALQ94_04001 | Not Available | Positive | 336757 - 337779 | 37514.3 |
| Putative terminase endonuclease subunit | ALQ94_04002 | Not Available | Positive | 337776 - 338498 | 27236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Canker disease | Causes | PMC3723570 |
| Bacterial canker | Causes | PMC10747947 |
| Bacterial canker | Causes | PMC9343901 |
