Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS18860 | Not Available | Negative | 907414 - 907707 | 11150.3 |
| duf808 domain-containing protein | CAY62_RS18865 | Not Available | Positive | 908335 - 909231 | 31581.5 |
| amidohydrolase | CAY62_RS18870 | Not Available | Negative | 909296 - 911260 | 72691.0 |
| transketolase | CAY62_RS18875 | Not Available | Negative | 911779 - 913773 | 72064.0 |
| transaldolase | CAY62_RS18880 | Not Available | Negative | 913872 - 914822 | 34766.6 |
| lactate dehydrogenase | CAY62_RS18885 | Not Available | Negative | 915318 - 916811 | 56896.0 |
| purine-nucleoside phosphorylase | CAY62_RS18890 | Not Available | Negative | 917054 - 917764 | 25792.1 |
| hypothetical protein | CAY62_RS18895 | Not Available | Positive | 918333 - 919091 | 29434.1 |
| duf3283 family protein | CAY62_RS18900 | Not Available | Positive | 919153 - 919359 | 7771.17 |
| hypothetical protein | CAY62_RS18905 | Not Available | Positive | 919575 - 920423 | 31284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
