Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | CAY62_RS18505 | Not Available | Negative | 836075 - 837247 | 44292.4 |
| helix-turn-helix domain-containing protein | CAY62_RS18510 | Not Available | Negative | 837450 - 838466 | 38675.1 |
| hypothetical protein | CAY62_RS18515 | Not Available | Negative | 838614 - 839441 | 31082.2 |
| hypothetical protein | CAY62_RS18525 | Not Available | Positive | 839938 - 840333 | 14519.3 |
| f0f1 atp synthase subunit a | CAY62_RS18530 | Not Available | Positive | 840335 - 841102 | 29146.7 |
| f0f1 atp synthase subunit c | CAY62_RS18535 | Not Available | Positive | 841150 - 841386 | 7940.13 |
| f0f1 atp synthase subunit b | CAY62_RS18540 | Not Available | Positive | 841435 - 841905 | 17712.3 |
| f0f1 atp synthase subunit delta | CAY62_RS18545 | Not Available | Positive | 841920 - 842468 | 20299.3 |
| f0f1 atp synthase subunit alpha | CAY62_RS18550 | Not Available | Positive | 842481 - 844022 | 55494.5 |
| f0f1 atp synthase subunit gamma | CAY62_RS18555 | Not Available | Positive | 844066 - 844938 | 32449.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
