Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | CAY62_RS22085 | Not Available | Positive | 826015 - 826953 | 35239.1 |
| m14 family metallocarboxypeptidase | CAY62_RS18460 | Not Available | Negative | 827018 - 827941 | 34142.6 |
| dps family protein | CAY62_RS18465 | Not Available | Positive | 828293 - 828826 | 20517.1 |
| hlyd family secretion protein | CAY62_RS18470 | Not Available | Negative | 828937 - 830070 | 42191.1 |
| duf3302 domain-containing protein | CAY62_RS18475 | Not Available | Negative | 830071 - 830460 | 15232.2 |
| had-ia family hydrolase | CAY62_RS18480 | Not Available | Negative | 830722 - 831411 | 25425.5 |
| hypothetical protein | CAY62_RS18485 | Not Available | Negative | 831590 - 832045 | 17637.8 |
| catb-related o-acetyltransferase | CAY62_RS18490 | Not Available | Positive | 832133 - 832789 | 24761.4 |
| enoyl-acp reductase fabv | CAY62_RS18495 | Not Available | Negative | 832841 - 834043 | 44596.4 |
| acetate/propionate family kinase | CAY62_RS18500 | Not Available | Positive | 834347 - 835540 | 43256.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
