Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n-acetylgalactosamine transporter subunit iic | CAY62_RS18410 | Not Available | Positive | 817335 - 818117 | 27417.3 |
| pts n-acetylgalactosamine transporter subunit iid | CAY62_RS18415 | Not Available | Positive | 818107 - 818991 | 32057.9 |
| pts galactosamine/n-acetylgalactosamine transporter subunit iia | CAY62_RS18420 | Not Available | Positive | 819058 - 819492 | 15462.9 |
| trehalose operon repressor trer | CAY62_RS18425 | Not Available | Positive | 819616 - 820566 | 34621.8 |
| hypothetical protein | CAY62_RS18430 | Not Available | Negative | 820572 - 820877 | 11280.2 |
| pts trehalose transporter subunit iibc | CAY62_RS18435 | Not Available | Positive | 821180 - 822634 | 52040.9 |
| alpha,alpha-phosphotrehalase | CAY62_RS18440 | Not Available | Positive | 822702 - 824375 | 64854.2 |
| class i sam-dependent methyltransferase | CAY62_RS18445 | Not Available | Negative | 824396 - 825166 | 29531.2 |
| is200/is605 family transposase | CAY62_RS18450 | Not Available | Negative | 825322 - 825723 | 15119.4 |
| helix-turn-helix domain-containing protein | CAY62_RS22080 | Not Available | Positive | 825809 - 826018 | 8147.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
