Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | CAY62_RS18310 | Not Available | Negative | 792308 - 793282 | 36196.9 |
| aaa family atpase | CAY62_RS18315 | Not Available | Negative | 793286 - 794500 | 45956.2 |
| replication initiator protein rctb domain-containing protein | CAY62_RS18320 | Not Available | Positive | 795676 - 797676 | 75987.5 |
| patatin-like phospholipase family protein | CAY62_RS18325 | Not Available | Positive | 797779 - 800049 | 84189.5 |
| arac family transcriptional regulator | CAY62_RS18330 | Not Available | Negative | 800260 - 801054 | 30680.2 |
| hypothetical protein | CAY62_RS18335 | Not Available | Positive | 801210 - 801605 | 14393.0 |
| 3'-5' exonuclease | CAY62_RS18340 | Not Available | Positive | 801727 - 802272 | 20816.1 |
| dmt family transporter | CAY62_RS18345 | Not Available | Positive | 802464 - 803354 | 32394.2 |
| lysr family transcriptional regulator | CAY62_RS18350 | Not Available | Positive | 803530 - 804438 | 34296.6 |
| amino acid permease | CAY62_RS18355 | Not Available | Negative | 804518 - 805846 | 48661.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
