Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS18120 | Not Available | Negative | 735800 - 736198 | 13991.4 |
| selb c-terminal domain-containing protein | CAY62_RS18125 | Not Available | Negative | 736359 - 736691 | 12981.8 |
| hypothetical protein | CAY62_RS18130 | Not Available | Negative | 736666 - 737232 | 20916.2 |
| Trna-sec(p) | Not Available | Not Available | Positive | 737345 - 737432 | Not Available |
| is5 family transposase | CAY62_RS18135 | Not Available | Positive | 737887 - 738683 | 30107.1 |
| gh92 family glycosyl hydrolase | CAY62_RS18140 | Not Available | Negative | 739541 - 741844 | 85504.7 |
| is630 family transposase | CAY62_RS18145 | Not Available | Positive | 741890 - 742921 | 39175.8 |
| hypothetical protein | CAY62_RS21645 | Not Available | Negative | 742899 - 743069 | 6189.48 |
| gnat family n-acetyltransferase | CAY62_RS18150 | Not Available | Negative | 743301 - 743810 | 19311.1 |
| gh92 family glycosyl hydrolase | CAY62_RS18155 | Not Available | Negative | 744339 - 747056 | 100936.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
