Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3010 family protein | CAY62_RS17525 | Not Available | Positive | 609544 - 609966 | 16092.6 |
| dead/deah box helicase | CAY62_RS17530 | Not Available | Positive | 610142 - 611437 | 47543.4 |
| hypothetical protein | CAY62_RS17535 | Not Available | Positive | 611592 - 611972 | 14475.4 |
| leucine-rich repeat domain-containing protein | CAY62_RS17540 | Not Available | Negative | 612047 - 612535 | 18248.7 |
| duf3820 family protein | CAY62_RS17545 | Not Available | Negative | 612546 - 612761 | 8252.24 |
| nudix hydrolase | CAY62_RS17550 | Not Available | Negative | 612765 - 613304 | 20611.4 |
| hypothetical protein | CAY62_RS17555 | Not Available | Negative | 613420 - 615111 | 64384.6 |
| monovalent cation:proton antiporter-2 (cpa2) family protein | CAY62_RS17560 | Not Available | Negative | 615224 - 617188 | 71671.0 |
| nad(p)h-dependent oxidoreductase | CAY62_RS17565 | Not Available | Negative | 617194 - 617808 | 23503.2 |
| iron-containing alcohol dehydrogenase | CAY62_RS17570 | Not Available | Positive | 618092 - 619240 | 41621.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
