Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS17425 | Not Available | Negative | 592737 - 593240 | 18728.6 |
| patatin family protein | CAY62_RS17430 | Not Available | Positive | 593470 - 594309 | 31408.8 |
| hypothetical protein | CAY62_RS17440 | Not Available | Positive | 595103 - 595378 | 10734.0 |
| hypothetical protein | CAY62_RS17445 | Not Available | Positive | 595504 - 595815 | 12300.5 |
| hypothetical protein | CAY62_RS17450 | Not Available | Negative | 596005 - 596304 | 10949.2 |
| aspartate/glutamate racemase family protein | CAY62_RS17455 | Not Available | Negative | 596448 - 597509 | 38349.1 |
| hypothetical protein | CAY62_RS17460 | Not Available | Negative | 597735 - 598034 | 10999.5 |
| sensor histidine kinase | CAY62_RS22040 | Not Available | Negative | 598515 - 598847 | 11779.1 |
| histidine kinase dimerization/phospho-acceptor domain-containing protein | CAY62_RS17465 | Not Available | Negative | 598880 - 599770 | 34213.0 |
| recq family atp-dependent dna helicase | CAY62_RS17470 | Not Available | Negative | 599760 - 600068 | 11540.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
