Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS17275 | Not Available | Negative | 516340 - 516933 | 22327.6 |
| cdc27 family protein | CAY62_RS17280 | Not Available | Positive | 516996 - 518096 | 41535.1 |
| hypothetical protein | CAY62_RS17285 | Not Available | Negative | 518282 - 521038 | 94738.9 |
| ompa family protein | CAY62_RS17290 | Not Available | Negative | 521056 - 521577 | 18714.0 |
| duf11 domain-containing protein | CAY62_RS17295 | Not Available | Negative | 521595 - 528065 | 240985.0 |
| beta strand repeat-containing protein | CAY62_RS17300 | Not Available | Negative | 528321 - 531584 | 111081.0 |
| hypothetical protein | CAY62_RS17305 | Not Available | Negative | 531677 - 532279 | 22528.7 |
| geved domain-containing protein | CAY62_RS17310 | Not Available | Negative | 532486 - 540822 | 295072.0 |
| geved domain-containing protein | CAY62_RS17315 | Not Available | Negative | 541138 - 551148 | 351187.0 |
| geved domain-containing protein | CAY62_RS17320 | Not Available | Negative | 551335 - 573015 | 755422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
