Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavohemoglobin expression-modulating qegla motif protein | CAY62_RS17170 | Not Available | Positive | 492243 - 494225 | 75784.8 |
| hypothetical protein | CAY62_RS17175 | Not Available | Positive | 494390 - 494764 | 14310.6 |
| protein-disulfide reductase dsbd family protein | CAY62_RS17180 | Not Available | Positive | 494861 - 496918 | 74710.9 |
| protein disulfide oxidoreductase | CAY62_RS17185 | Not Available | Positive | 496982 - 497437 | 16962.8 |
| nlpc/p60 family protein | CAY62_RS17190 | Not Available | Negative | 497556 - 498068 | 18925.2 |
| is5 family transposase | CAY62_RS17195 | Not Available | Positive | 498561 - 499348 | 29782.7 |
| 1-acylglycerol-3-phosphate o-acyltransferase | CAY62_RS17200 | Not Available | Positive | 499421 - 500176 | 28914.3 |
| rna-guided endonuclease insq/tnpb family protein | CAY62_RS17205 | Not Available | Negative | 500253 - 501395 | 43160.0 |
| is200/is605 family transposase | CAY62_RS17210 | Not Available | Positive | 501514 - 501879 | 13725.7 |
| duf2750 domain-containing protein | CAY62_RS17215 | Not Available | Negative | 502001 - 502354 | 13381.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
