Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine transferase | CAY62_RS16635 | Not Available | Negative | 376479 - 378119 | 61993.9 |
| hypothetical protein | CAY62_RS16640 | Not Available | Positive | 378513 - 378944 | 16724.8 |
| duf3389 domain-containing protein | CAY62_RS16645 | Not Available | Negative | 379003 - 379239 | 8423.11 |
| hotdog fold thioesterase | CAY62_RS16650 | Not Available | Negative | 379236 - 379670 | 15986.3 |
| ompa family protein | CAY62_RS16655 | Not Available | Negative | 379808 - 380815 | 36845.6 |
| nad(p)-binding protein | CAY62_RS16660 | Not Available | Positive | 381202 - 382680 | 54256.4 |
| atp-dependent rna helicase dbpa | CAY62_RS16665 | Not Available | Negative | 382756 - 384147 | 50718.4 |
| hypothetical protein | CAY62_RS21635 | Not Available | Negative | 384278 - 384427 | 5258.54 |
| sulfatase-like hydrolase/transferase | CAY62_RS16670 | Not Available | Negative | 384635 - 385714 | 40711.8 |
| recq family atp-dependent dna helicase | CAY62_RS16675 | Not Available | Negative | 385911 - 386129 | 8239.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
