Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recq family atp-dependent dna helicase | CAY62_RS16490 | Not Available | Negative | 351438 - 351808 | 13353.7 |
| lysr family transcriptional regulator | CAY62_RS16495 | Not Available | Positive | 351959 - 352804 | 30894.3 |
| hypothetical protein | CAY62_RS16500 | Not Available | Positive | 352891 - 353409 | 19356.8 |
| methyltransferase family protein | CAY62_RS22265 | Not Available | Negative | 353426 - 353959 | 20248.3 |
| alpha/beta fold hydrolase | CAY62_RS16510 | Not Available | Negative | 354072 - 354884 | 30132.5 |
| hypothetical protein | CAY62_RS21630 | Not Available | Positive | 355277 - 355453 | 5809.28 |
| hypothetical protein | CAY62_RS16515 | Not Available | Negative | 355434 - 358511 | 116017.0 |
| hypothetical protein | CAY62_RS16520 | Not Available | Negative | 358629 - 359378 | 25251.7 |
| hypothetical protein | CAY62_RS22210 | Not Available | Negative | 359728 - 359862 | 4440.57 |
| hypothetical protein | CAY62_RS16530 | Not Available | Negative | 360097 - 360597 | 19814.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
