Photobacterium damselae subsp. damselae str. KC-Na-1

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
Strainsubsp. damselae KC-Na-1

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcoastal waters; estuaries; Marine; oceans; seaweeds; sediments
Biotic relationshipNot Available
Host(s)Homo sapiens, Pancrustacea, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid

Gene Summary

Adenine Count

24830 bp

Thymine Count

23536 bp

Guanine Count

16496 bp

Cytosine Count

16140 bp

Genome Length

81002 bp

Protein-coding Genes

81 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2861 family proteinCAY62_RS16245Not AvailableNegative299959 - 30082532862.2
response regulator transcription factorCAY62_RS16250Not AvailableNegative300830 - 30148924693.7
sensor histidine kinase vxraCAY62_RS16255Not AvailableNegative301464 - 30290655128.7
re/si-specific nad(p)(+) transhydrogenase subunit betaCAY62_RS16260Not AvailableNegative303097 - 30447348541.8
re/si-specific nad(p)(+) transhydrogenase subunit alphaCAY62_RS16265Not AvailableNegative304484 - 30604054925.4
hlyu family transcriptional regulatorCAY62_RS16270Not AvailableNegative306585 - 30686610570.7
hypothetical proteinCAY62_RS16275Not AvailableNegative307086 - 3073017551.0
hypothetical proteinCAY62_RS16280Not AvailableNegative307676 - 3078677252.8
recq family atp-dependent dna helicaseCAY62_RS16285Not AvailablePositive308481 - 3086155002.0
bifunctional metallophosphatase/5'-nucleotidaseCAY62_RS16290Not AvailableNegative308758 - 31051864202.7

Displaying genes 431 – 440 of 4224 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Haemorrhagic septicemiaCausesPMC12895208
Skin lesionsCausesPMC12895208
Necrotizing fasciitisCausesPMC12895208
Soft-tissue infectionCausesPMC8231020
Chronic suppurative pneumoniaCausesPMC9796189
Splenic lymphoid depletionCausesPMC9796189
Wound infectionsCausesPMC9796189
Hemorrhagic septicemiaCausesPMC9796189
PneumoniaCausesPMC9796189

Displaying health effects 1 – 9 of 9 in total