Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | CAY62_RS16195 | Not Available | Positive | 291117 - 291875 | 28681.8 |
| lysr family transcriptional regulator | CAY62_RS16200 | Not Available | Positive | 292184 - 293110 | 35367.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CAY62_RS16205 | Not Available | Negative | 293209 - 294318 | 41991.5 |
| arac family ligand binding domain-containing protein | CAY62_RS16210 | Not Available | Positive | 294592 - 295269 | 24792.2 |
| hypothetical protein | CAY62_RS16215 | Not Available | Negative | 295399 - 295803 | 15689.1 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | CAY62_RS16220 | Not Available | Negative | 295889 - 296419 | 20164.2 |
| ammonia-dependent nad(+) synthetase | CAY62_RS16225 | Not Available | Positive | 296638 - 297474 | 30558.5 |
| hd domain-containing protein | CAY62_RS16230 | Not Available | Negative | 297564 - 298082 | 19965.7 |
| yoah family protein | CAY62_RS16235 | Not Available | Negative | 298311 - 298460 | 5390.36 |
| nnrs family protein | CAY62_RS16240 | Not Available | Negative | 298544 - 299746 | 45107.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
