Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS19920 | Not Available | Negative | 18834 - 19391 | 21289.4 |
| hypothetical protein | CAY62_RS19925 | Not Available | Negative | 19536 - 19856 | 11887.7 |
| para family protein | CAY62_RS19930 | Not Available | Negative | 19875 - 20651 | 27916.7 |
| is1 family transposase | CAY62_RS19935 | Not Available | Negative | 21079 - 21762 | 26757.5 |
| hypothetical protein | CAY62_RS19940 | Not Available | Negative | 21771 - 22067 | 11203.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CAY62_RS19945 | Not Available | Negative | 22223 - 23170 | 34960.7 |
| hypothetical protein | CAY62_RS19950 | Not Available | Negative | 23243 - 23455 | 7653.23 |
| is1 family transposase | CAY62_RS19955 | Not Available | Negative | 23900 - 25109 | 46942.5 |
| hypothetical protein | CAY62_RS19960 | Not Available | Negative | 25118 - 25414 | 11241.3 |
| ssle/acfd family lipoprotein zinc metalloprotease | CAY62_RS19965 | Not Available | Negative | 25708 - 31146 | 201260.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
